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A

adaptivityControl(int) - Method in class de.uni_stuttgart.isa.liquidsvm.Config
Activates adaptivity in the hyperparameter grid.

C

calculateDataCover(int, double[][]) - Static method in class de.uni_stuttgart.isa.liquidsvm.SVM
Helper function to calculate Voronoi centers that cover the data set s.t. each cell should not have more than NNs samples.
clean() - Method in class de.uni_stuttgart.isa.liquidsvm.SVM
 
Config - Class in de.uni_stuttgart.isa.liquidsvm
 
Config() - Constructor for class de.uni_stuttgart.isa.liquidsvm.Config
 
Config(Config) - Constructor for class de.uni_stuttgart.isa.liquidsvm.Config
 

D

Data(double[][], double[], int, int) - Constructor for class de.uni_stuttgart.isa.liquidsvm.LiquidData.Data
 
de.uni_stuttgart.isa.liquidsvm - package de.uni_stuttgart.isa.liquidsvm
liquidSVM contains bindings to Ingo Steinwarts liquidSVM implementation.
DEFAULT_CONSTRAINT_FACTORS - Static variable in class de.uni_stuttgart.isa.liquidsvm.SVM.NPL
 
DEFAULT_WEIGHTS - Static variable in class de.uni_stuttgart.isa.liquidsvm.SVM.EX
 
DEFAULT_WEIGHTS - Static variable in class de.uni_stuttgart.isa.liquidsvm.SVM.QT
 
dim - Variable in class de.uni_stuttgart.isa.liquidsvm.LiquidData.Data
 
dim - Variable in class de.uni_stuttgart.isa.liquidsvm.LiquidData
 
display(int) - Method in class de.uni_stuttgart.isa.liquidsvm.Config
Sets the display level starting at 0 which means no information.

E

ENABLE_LOAD_WITHOUT_LIBRARY - Static variable in class de.uni_stuttgart.isa.liquidsvm.SVM
 
entries() - Method in class de.uni_stuttgart.isa.liquidsvm.Config
Creates a List that contains all key-value pairs in the order they were set.
errors - Variable in class de.uni_stuttgart.isa.liquidsvm.ResultAndErrors
The errors of an SVM.test
EX(LiquidData) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.EX
 
EX(LiquidData, double[]) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.EX
 
EX(LiquidData, double[], Config) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.EX
 
EX(LiquidData.Data) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.EX
 
EX(LiquidData.Data, double[]) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.EX
 
EX(LiquidData.Data, double[], Config) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.EX
 
EX(double[][], double[]) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.EX
 
EX(double[][], double[], double[]) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.EX
 
EX(double[][], double[], double[], Config) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.EX
 
extractFeatures(double[][]) - Static method in class de.uni_stuttgart.isa.liquidsvm.LiquidData
 
extractLabels(double[][]) - Static method in class de.uni_stuttgart.isa.liquidsvm.LiquidData
 

F

filePrefix - Variable in class de.uni_stuttgart.isa.liquidsvm.LiquidData
 
finalize() - Method in class de.uni_stuttgart.isa.liquidsvm.SVM
 
folds(int) - Method in class de.uni_stuttgart.isa.liquidsvm.Config
 

G

get(String) - Method in class de.uni_stuttgart.isa.liquidsvm.Config
 
getConfig(String) - Method in class de.uni_stuttgart.isa.liquidsvm.SVM
Gets configuration of this SVM
getCover(int) - Method in class de.uni_stuttgart.isa.liquidsvm.SVM
 
getLastResult() - Method in class de.uni_stuttgart.isa.liquidsvm.SVM
Keeps the last result and errors around after SVM.test(double[][], double[], java.lang.String...)ing.
getSelectErrs() - Method in class de.uni_stuttgart.isa.liquidsvm.SVM
Returns many information upon SVM.select(java.lang.String...)ing.
getSolutionCoeffs(int, int, int) - Method in class de.uni_stuttgart.isa.liquidsvm.SVM
 
getSolutionSVs(int, int, int) - Method in class de.uni_stuttgart.isa.liquidsvm.SVM
 
getTrainErrs() - Method in class de.uni_stuttgart.isa.liquidsvm.SVM
Returns many information upon SVM.train(java.lang.String...)ing.
gridChoice(int) - Method in class de.uni_stuttgart.isa.liquidsvm.Config
Sets the hyperparameter grid.

H

has(String) - Method in class de.uni_stuttgart.isa.liquidsvm.Config
 

I

iris - Static variable in class de.uni_stuttgart.isa.liquidsvm.LiquidData
 
iris_labs - Static variable in class de.uni_stuttgart.isa.liquidsvm.LiquidData
 
isAutoSelect() - Method in class de.uni_stuttgart.isa.liquidsvm.Config
 
isAutoTrain() - Method in class de.uni_stuttgart.isa.liquidsvm.Config
 
isSelected() - Method in class de.uni_stuttgart.isa.liquidsvm.SVM
Has the SVM already been selected.
isTrained() - Method in class de.uni_stuttgart.isa.liquidsvm.SVM
Has the SVM already been trained.

L

LiquidData - Class in de.uni_stuttgart.isa.liquidsvm
Contains training and testing features and labels which are usually read from comma separated files with names filePrefix.train.csv and filePrefix.test.csv.
LiquidData(String) - Constructor for class de.uni_stuttgart.isa.liquidsvm.LiquidData
 
LiquidData(String, String) - Constructor for class de.uni_stuttgart.isa.liquidsvm.LiquidData
 
LiquidData.Data - Class in de.uni_stuttgart.isa.liquidsvm
 
location - Variable in class de.uni_stuttgart.isa.liquidsvm.LiquidData
 
LS(LiquidData) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.LS
 
LS(LiquidData, Config) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.LS
 
LS(LiquidData, double) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.LS
 
LS(LiquidData, double, Config) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.LS
 
LS(LiquidData.Data) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.LS
 
LS(LiquidData.Data, Config) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.LS
 
LS(LiquidData.Data, double) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.LS
 
LS(LiquidData.Data, double, Config) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.LS
 
LS(double[][], double[]) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.LS
 
LS(double[][], double[], Config) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.LS
 
LS(double[][], double[], double) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.LS
 
LS(double[][], double[], double, Config) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.LS
 

M

main(String[]) - Static method in class de.uni_stuttgart.isa.liquidsvm.LiquidData
 
matrixToString(double[][]) - Static method in class de.uni_stuttgart.isa.liquidsvm.ResultAndErrors
 
MAX_CPU - Static variable in class de.uni_stuttgart.isa.liquidsvm.SVM
 
MC(LiquidData) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.MC
 
MC(LiquidData, Config) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.MC
 
MC(LiquidData, String) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.MC
 
MC(LiquidData, String, Config) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.MC
 
MC(LiquidData.Data) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.MC
 
MC(LiquidData.Data, Config) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.MC
 
MC(LiquidData.Data, String) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.MC
 
MC(LiquidData.Data, String, Config) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.MC
 
MC(double[][], double[]) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.MC
 
MC(double[][], double[], Config) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.MC
 
MC(double[][], double[], String) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.MC
 
MC(double[][], double[], String, Config) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.MC
 
myconvert(double[]) - Static method in class de.uni_stuttgart.isa.liquidsvm.ResultAndErrors
 

N

NPL(LiquidData, double) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.NPL
 
NPL(LiquidData, double, double) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.NPL
 
NPL(LiquidData, double, double, double[], Config) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.NPL
 
NPL(LiquidData.Data, double) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.NPL
 
NPL(LiquidData.Data, double, double) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.NPL
 
NPL(LiquidData.Data, double, double, double[], Config) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.NPL
 
NPL(double[][], double[], double) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.NPL
 
NPL(double[][], double[], double, double) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.NPL
 
NPL(double[][], double[], double, double, double[], Config) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.NPL
 

P

partitionChoice(int) - Method in class de.uni_stuttgart.isa.liquidsvm.Config
Sets the partition choice.
predict(double[][], String...) - Method in class de.uni_stuttgart.isa.liquidsvm.SVM
Predicts labels for the given test data.

Q

QT(LiquidData) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.QT
 
QT(LiquidData, double[]) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.QT
 
QT(LiquidData, double[], Config) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.QT
 
QT(LiquidData.Data) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.QT
 
QT(LiquidData.Data, double[]) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.QT
 
QT(LiquidData.Data, double[], Config) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.QT
 
QT(double[][], double[]) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.QT
 
QT(double[][], double[], double[]) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.QT
 
QT(double[][], double[], double[], Config) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.QT
 

R

randomSeed(int) - Method in class de.uni_stuttgart.isa.liquidsvm.Config
 
readSVM(String) - Method in class de.uni_stuttgart.isa.liquidsvm.SVM
 
readTable(String) - Static method in class de.uni_stuttgart.isa.liquidsvm.LiquidData
 
readTable(String, String) - Static method in class de.uni_stuttgart.isa.liquidsvm.LiquidData
 
readTable(Reader, String) - Static method in class de.uni_stuttgart.isa.liquidsvm.LiquidData
 
remove(Object) - Method in class de.uni_stuttgart.isa.liquidsvm.Config
 
result - Variable in class de.uni_stuttgart.isa.liquidsvm.ResultAndErrors
The results of an SVM.test
ResultAndErrors - Class in de.uni_stuttgart.isa.liquidsvm
This class holds a result matrix and an errors matrix.
ResultAndErrors() - Constructor for class de.uni_stuttgart.isa.liquidsvm.ResultAndErrors
 
ResultAndErrors(double[][], double[][]) - Constructor for class de.uni_stuttgart.isa.liquidsvm.ResultAndErrors
 
ROC(LiquidData) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.ROC
 
ROC(LiquidData, int) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.ROC
 
ROC(LiquidData, int, Config) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.ROC
 
ROC(LiquidData.Data) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.ROC
 
ROC(LiquidData.Data, int) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.ROC
 
ROC(LiquidData.Data, int, Config) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.ROC
 
ROC(double[][], double[]) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.ROC
 
ROC(double[][], double[], int) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.ROC
 
ROC(double[][], double[], int, Config) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM.ROC
 

S

scale(boolean) - Method in class de.uni_stuttgart.isa.liquidsvm.Config
 
scenario(String) - Method in class de.uni_stuttgart.isa.liquidsvm.Config
Sets the scenario.
select(boolean) - Method in class de.uni_stuttgart.isa.liquidsvm.Config
Specifies whether selecting should start automagically at the end of initializing the SVM after the automatic training.
select(String...) - Method in class de.uni_stuttgart.isa.liquidsvm.SVM.EX
 
select(String...) - Method in class de.uni_stuttgart.isa.liquidsvm.SVM.NPL
 
select(String...) - Method in class de.uni_stuttgart.isa.liquidsvm.SVM.QT
 
select(String...) - Method in class de.uni_stuttgart.isa.liquidsvm.SVM.ROC
 
select(String...) - Method in class de.uni_stuttgart.isa.liquidsvm.SVM
Selects the best hyperparameter pair according to validation error.
set(String, String) - Method in class de.uni_stuttgart.isa.liquidsvm.Config
Sets the value for the key and remembers the order in which it was added.
setConfig(String, String) - Method in class de.uni_stuttgart.isa.liquidsvm.SVM
Sets configuration directly in the SVM.
setConfig(String, int) - Method in class de.uni_stuttgart.isa.liquidsvm.SVM
Sets configuration directly in the SVM.
setConfig(String, double) - Method in class de.uni_stuttgart.isa.liquidsvm.SVM
Sets configuration directly in the SVM.
setConfig(String, double[]) - Method in class de.uni_stuttgart.isa.liquidsvm.SVM
Sets configuration directly in the SVM.
setConfigAll(Config) - Method in class de.uni_stuttgart.isa.liquidsvm.SVM
Sets all the values in the config in this SVM.
size - Variable in class de.uni_stuttgart.isa.liquidsvm.LiquidData.Data
 
SVM - Class in de.uni_stuttgart.isa.liquidsvm
liquidSVM SVM base class.
SVM() - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM
For quick demonstration initialize a least squares SVM using the trees dataset.
SVM(String, double[][], double[], Config) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM
Initializes an SVM with training data and optionally configuration options and a scenario.
SVM(String, LiquidData.Data, Config) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM
Initializes an SVM with training data and optionally configuration options and a scenario.
SVM(String, LiquidData, Config) - Constructor for class de.uni_stuttgart.isa.liquidsvm.SVM
Initializes an SVM with training data and optionally configuration options and a scenario and performs testing.
SVM.EX - Class in de.uni_stuttgart.isa.liquidsvm
Expectile regression learning scenario.
SVM.LS - Class in de.uni_stuttgart.isa.liquidsvm
Least squares regression learning scenario.
SVM.MC - Class in de.uni_stuttgart.isa.liquidsvm
Binary and multi-class learning scenario.
SVM.NPL - Class in de.uni_stuttgart.isa.liquidsvm
Neyman-Pearson lemma learning scenario.
SVM.QT - Class in de.uni_stuttgart.isa.liquidsvm
Quantile regression learning scenario.
SVM.ROC - Class in de.uni_stuttgart.isa.liquidsvm
Receiver Operating Characteristic curve learning scenario.

T

test - Variable in class de.uni_stuttgart.isa.liquidsvm.LiquidData
 
test(double[][], double[], String...) - Method in class de.uni_stuttgart.isa.liquidsvm.SVM
Predicts labels for the given test data and compares these to the given labs.
test(LiquidData.Data, String...) - Method in class de.uni_stuttgart.isa.liquidsvm.SVM
Predicts labels for the given test.x data and compares these to the given test.y.
testX - Variable in class de.uni_stuttgart.isa.liquidsvm.LiquidData
 
testY - Variable in class de.uni_stuttgart.isa.liquidsvm.LiquidData
 
threads(int) - Method in class de.uni_stuttgart.isa.liquidsvm.Config
Sets the number of threads to use.
toString() - Method in class de.uni_stuttgart.isa.liquidsvm.ResultAndErrors
 
train(boolean) - Method in class de.uni_stuttgart.isa.liquidsvm.Config
Specifies whether training should start automagically at the end of initializing the SVM.
train - Variable in class de.uni_stuttgart.isa.liquidsvm.LiquidData
 
train(String...) - Method in class de.uni_stuttgart.isa.liquidsvm.SVM
Performs training on the hyperparameter grid.
trainSize - Variable in class de.uni_stuttgart.isa.liquidsvm.LiquidData
 
trainX - Variable in class de.uni_stuttgart.isa.liquidsvm.LiquidData
 
trainY - Variable in class de.uni_stuttgart.isa.liquidsvm.LiquidData
 
trees - Static variable in class de.uni_stuttgart.isa.liquidsvm.LiquidData
 
trees_labs - Static variable in class de.uni_stuttgart.isa.liquidsvm.LiquidData
 

U

useCells() - Method in class de.uni_stuttgart.isa.liquidsvm.Config
 
useCells(boolean) - Method in class de.uni_stuttgart.isa.liquidsvm.Config
 
Util - Class in de.uni_stuttgart.isa.liquidsvm
 
Util() - Constructor for class de.uni_stuttgart.isa.liquidsvm.Util
 

V

voronoi(int) - Method in class de.uni_stuttgart.isa.liquidsvm.Config
 

X

x - Variable in class de.uni_stuttgart.isa.liquidsvm.LiquidData.Data
 

Y

y - Variable in class de.uni_stuttgart.isa.liquidsvm.LiquidData.Data
 
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